Package index
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run_pkoi() - Run pKOI Network Enrichment Analysis
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get_neighboring_nodes() - Get Neighboring Nodes in a Network
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pkoi_net - pkoi_net: Human-Specific Protein Knowledge Graph
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anatomy_annotation - Anatomical Entity Annotations from UBERON
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celltype_annotation - Cell Type Ontology Annotations (CL)
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clinicallab_annotation - Clinical Laboratory Measurement Annotations (LOINC)
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complex_annotation - Protein and Molecular Complex Annotations
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compound_annotation - Chemical Compound Annotations
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disease_annotation - Disease Ontology (DO) Annotations
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ec_annotation - Enzyme Commission (EC) Number Annotations
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go_annotation - Gene Ontology (GO) Term Annotations
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mirna_annotation - Human miRNA Annotations (miRBase-style)
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pathway_annotation - Pathway Annotations (WikiPathways)
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protein_annotation - Protein Annotations (UniProt-Based)
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proteindomain_annotation - Protein Domain Annotations (Pfam)
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proteinfamily_annotation - Protein Family Annotations (Pfam Clans)
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pwgroup_annotation - Pathway Group Annotations (Reactome Interaction Sets)
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reaction_annotation - Biochemical Reaction Annotations (KEGG-Based)